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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 157 Check: 0 ..
Name: COXB_HUMAN Len: 157 Check: 5648 Weight: 1.49
Name: CG11043_DROME Len: 157 Check: 4665 Weight: 0.75
Name: CG11015_DROME Len: 157 Check: 6538 Weight: 0.75
Name: Consensus Len: 157 Check: 7888 Weight: 0.00
//
1 60
COXB_HUMAN MASRLLRGA GTLAAQALRA RGPSGA---- -AAMRSMASG
CG11043_DR MSSYISRLLK AQSASKRLIS NLTQRDGKLS SLLRRLGLQW QGSAAAPQQR PISTTQVQKS
CG11015_DR MA SICGRMALR- ---AAARQN- -VAYTPVRFC
Consensus .......... .......... ....r....a s.l.r.aLr. .g.aaA.q.. ..a.t.v...
61 120
COXB_HUMAN GGVPTDEEQA TGLEREIMLA AKKGLD-PYN V-LAPKGASG TREDPNLVPS ISNKRIVGCI
CG11043_DR ALIADD-QLV TGIQKREMLL AKQGCEDPWG FSKVIRRGSG RENDPTVVPS AFDARLVGCL
CG11015_DR KMMNDPLEHA TGIEKRELLL KAAGNDNPFD M-KVFKRGAG TKENPNLIPS AFDARIVGCI
Consensus ....dd.#.a TGi#kre$Ll ak.G.#.P.. ..kv.krgsG t.##Pnl!PS af#aRiVGCi
121 157
COXB_HUMAN CEEDNTSVVW FWLHKGQAQR CPRCGAHYKL VPQQLAH
CG11043_DR CLDDRL-PKW MWIEKDEGPK RCECGHYFIL KNVPPV
CG11015_DR CEEDQTYVQW MWLQKGN-QK RCECGHWFKL VEKAAV
Consensus Ce#D.t.v.W mWl.Kg#.qk rceCGh.%kL v....v.