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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 443 Check: 0 ..
Name: PDK1 Len: 443 Check: 9158 Weight: 0.49
Name: PDK2 Len: 443 Check: 5419 Weight: 0.49
Name: PDK3 Len: 443 Check: 4781 Weight: 0.84
Name: PDK4 Len: 443 Check: 5148 Weight: 1.11
Name: Pdk_DROME Len: 443 Check: 4404 Weight: 2.07
Name: Consensus Len: 443 Check: 3904 Weight: 0.00
//
1 60
PDK1 MRLARLLRGA ALAGPGPGLR AAGFSRSFSS DSGSSPASER G-VPGQVDFY ARFSPSPLSM
PDK2 MRWV WALLKNASLA G-APKYIEHF SKFSPSPLSM
PDK3 MRLFRWLLKQ P-VPKQIERY SRFSPSPLSI
PDK4 MKAARFV LRSAGSLNGA GLVPREVEHF SRYSPSPLSM
Pdk_DROME MRLFP VRFSAASSSM ASLAKMLDFY SGFNPSPLSI
Consensus .....f. .r.s...s.. ...pk..#f% S.%sPSPLSi
61 120
PDK1 KQFLDFGSVN ACEKTSFMFL RQELPVRLAN IMKEISLLPD NLLRTPSVQL VQSWYIQSLQ
PDK2 KQFLDFGSSN ACEKTSFTFL RQELPVRLAN IMKEINLLPD RVLSTPSVQL VQSWYVQSLL
PDK3 KQFLDFGRDN ACEKTSYMFL RKELPVRLAN TMREVNLLPD NLLNRPSVGL VQSWYMQSFL
PDK4 KQLLDFGSEN ACERTSFAFL RQELPVRLAN ILKEIDILPT QLVNTSSVQL VKSWYIQSLM
Pdk_DROME KQFMDFG-QN ACEKKSYIFL RKELPVRLAN IMKEIALLPD NLLHTRSVSE VSSWYVKSFE
Consensus KQf$DFG..N ACEktS%.FL RkELPVRLAN i$kE!.lLPd #Ll.t.SV.l V.SWYvqSf.
121 180
PDK1 ELLDFKDKSA EDAKAIYDFT DTVIRIRNRH NDVIPTMAQG VIEYKESFG- -VDPVTSQNV
PDK2 DIMEFLDKDP EDHRTLSQFT DALVTIRNRH NDVVPTMAQG VLEYKDTYG- -DDPVSNQNI
PDK3 ELLEYENKSP EDPQVLDNFL QVLIKVRNRH NDVVPTMAQG VIEYKEKFG- -FDPFISTNI
PDK4 DLVEFHEKSP DDQKALSDFV DTLIKVRNRH HNVVPTMAQG IIEYKDACT- -VDPVTNQNL
Pdk_DROME DVLVYEKAEP THDN-LQKFV ADLDLIRNRH NDVVQTMAQG VIEMKENEGG QVDAPTESSI
Consensus #.l.%e.k.P .d...L..Fv ..L..!RNRH n#VVpTMAQG !IEyK#..g. .vDp.t..ni
181 240
PDK1 QYFLDRFYMS RISIRMLLNQ HSLLFGGKGK GSPSHRKHIG SINPNCNVLE VIKDGYENAR
PDK2 QYFLDRFYLS RISIRMLINQ HTLIFDGST- -NPAHPKHIG SIDPNCNVSE VVKDAYDMAK
PDK3 QYFLDRFYTN RISFRMLINQ HTLLFGGDT- -NPVHPKHIG SIDPTCNVAD VVKDAYETAK
PDK4 QYFLDRFYMN RISTRMLMNQ HILIFSDSQT GNPSH---IG SIDPNCDVVA VVQDAFECSR
Pdk_DROME QYFLDRLYMS RISIRMLINQ HTLLFGGNPH AGGRH---IG CLDPACDLSD VVRDAYENAR
Consensus QYFLDRfYms RISiRMLiNQ HtLlFgg... ..p.H...IG siDP.C#vsd VV.DA%Enar
241 300
PDK1 RLCDLYYINS PELELEELNA KSPGQ-PIQV VYVPSHLYHM VFELFKNAMR ATMEHH-ANR
PDK2 LLCDKYYMAS PDLEIQEINA ANSKQ-PIHM VYVPSHLYHM LFELFKNAMR ATVESH-ESS
PDK3 MLCEQYYLVA PELEVEEFNA KAPDK-PIQV VYVPSHLFHM LFELFKNSMR ATVELY-EDR
PDK4 MLCDQYYLSS PELKLTQVNG KFPDQ-PIHI VYVPSHLHHM LFELFKNAMR ATVEHQ-ENQ
Pdk_DROME FLCDQYYLTS PALEIQQHSS EPGDNLPIRT VYVPSHLYYM LFELFKNSMR AVVEHHGHDN
Consensus .LC#qYY$.s P.Leiq#.n. ...d..PI.. VYVPSHLyhM LFELFKNsMR AtVEhh..#.
301 360
PDK1 GV-YPPIQVH VTLGNEDLTV KMSDRGGGVP LRKIDRLFNY MYSTAPRPRV ETSRAVPLAG
PDK2 LI-LPPIKVM VALGEEDLSI KMSDRGGGVP LRKIERLFSY MYSTAPTPQP GTG-GTPLAG
PDK3 KEGYPAVKTL VTLGKEDLSI KISDLGGGVP LRKIDRLFNY MYSTAPRPSL EPTRAAPLAG
PDK4 PS-LTPIEVI VVLGKEDLTI KISDRGGGVP LRIIDRLFSY TYSTAPTPVM DNSRNAPLAG
Pdk_DROME NDTLPPLKVA ICKGKEDICV KISDQGGGIP RSQTDQLFKY MYSTAPQPSK SDLHTVPLAG
Consensus ...lpp.kv. !.lGkEDl.! KiSD.GGG!P lr.iDrLF.Y mYSTAP.Ps. .....vPLAG
361 420
PDK1 FGYGLPISRL YAQYFQGDLK LYSLEGYGTD AVIYIKALST DSIERLPVYN KAAWKHYNTN
PDK2 FGYGLPISRL YAKYFQGDLQ LFSMEGFGTD AVIYLKALST DSVERLPVYN KSAWRHYQTI
PDK3 FGYGLPISRL YARYFQGDLK LYSMEGVGTD AVIYLKALSS ESFERLPVFN KSAWRHYKTT
PDK4 FGYGLPISRL YAKYFQGDLN LYSLSGYGTD AIIYLKALSS ESIEKLPVFN KSAFKHYQMS
Pdk_DROME YGYGLPISRL YARYFHGDIV LLSCEGFGTD AIIYLKALSD EANELLPIFN KTSSKFYRAT
Consensus %GYGLPISRL YArYFqGDl. L.S.eGfGTD A!IYLKALS. #s.E.LP!%N K.a.khY..t
421 443
PDK1 HEADDWCVPS REPKDMTTFR SA
PDK2 QEAGDWCVPS TEPKNTSTYR VS
PDK3 PEADDWSNPS SEPRDASKYK AKQ
PDK4 SEADDWCIPS REPKNLAKEV AM
Pdk_DROME VPTGDWSNQV KYAKKKKTSA VNQ
Consensus .eagDWsnps .epk...t.. v.q