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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 839 Check: 0 ..
Name: PGN_HUMAN Len: 839 Check: 6904 Weight: 1.00
Name: CG2658_DROME Len: 839 Check: 949 Weight: 1.00
Name: Consensus Len: 839 Check: 1952 Weight: 0.00
//
1 60
PGN_HUMAN MAVLLL LLRALGRGPG PGPRPLWGPG
CG2658_DRO MLKGLRHVRN ALQRGGSQLI QLRSATGQPP RIGRELSLLQ LSRRQVMQLQ AEYKAIVGLI
Consensus .......... .......... .......... ....easLLq LlRaqgrqlq aepraiwGlg
61 120
PGN_HUMAN PAWSPGFPAR PGRGRPYMAS RPPGDLAEAG GRALQSLQLR LLTPTFEGIN GLLLKQHLVQ
CG2658_DRO ARSLQLTPKE VRLMHLRSLS STAKPPTASD GKTEKHEQPE KGSAKAKDDS SKEKKSAVAA
Consensus aaslqgfPar prrgrlrmaS rpagdlaaad GraeqheQlr lgsakaeddn glelKqalaa
121 180
PGN_HUMAN NPVRLWQLLG GTFYFNTSRL KQKNKEKDKS KGKAPEEDEE ERRRRERDDQ MYRERLRTLL
CG2658_DRO EDGDKSSRAA GEEAASTPTS SSTIGEPGED PNKNSNENDE KMRSVLTKAV LWLFTIYMFV
Consensus #dgrlsqraa GeeaanTprl kqkngEkded knKap#E##E erRrrerdaq $wrerirmll
181 240
PGN_HUMAN VIAVVMSLLN ALSTSGGS-- ISWNDFVHEM LAKGEVQRVQ VVPESDVVEV YLHPGAVVFG
CG2658_DRO AFFSLLITPR SERPEGSTRY VSWNEFVHHM LAVGEVKELI IRPDMEMVTI ILHEGAVIKG
Consensus aiasl$illr aerpeGgs.. !SWN#FVHeM LAkGEVqrlq !rP#m#mVe! iLHeGAV!kG
241 300
PGN_HUMAN RPRLALMYRM QVANIDKFEE KLRAAEDELN IEAKDRIPVS YKRTGFFGNA LYSVGMTAVG
CG2658_DRO RKVSSTIFHM AVADANKFEE KLRDVEKRLG I--KDGVPVT YDRQT---DT TGRILMLLLV
Consensus Rkrlali%rM aVA#a#KFEE KLRaaEdrLn I..KDr!PVs YdRqg...#a lgr!gMlalg
301 360
PGN_HUMAN LAILWYVFRL AGMTGREGGF SAFNQLKMAR FTIVDG-KMG KGVSFKDVAG MHEAKLEVRE
CG2658_DRO CALLMSIATR MKSIKSPLSM DSFNQMGRAK FTLVDPFDGG RGVLFRDVAG LSEAKQEVKE
Consensus cAiLms!arr agmigreggm daFNQ$grAr FTiVDg.dgG rGVlFrDVAG $hEAKqEVrE
361 420
PGN_HUMAN FVDYLKSPER FLQLGAKVPK GALLLGPPGC GKTLLAKAVA TEAQVPFLAM AGPEFVEVIG
CG2658_DRO FVDYLKSPEK YQRLGAKVPR GALLLGPPGC GKTLLAKAVA TEAQVPFLSM NGSEFIEMIG
Consensus FVDYLKSPEr %qrLGAKVPr GALLLGPPGC GKTLLAKAVA TEAQVPFLaM aGpEF!EmIG
421 480
PGN_HUMAN GLGAARVRSL FKEARARAPC IVYIDEIDAV GKKRSTT--M SGFSNTEEEQ TLNQLLVEMD
CG2658_DRO GLGAARVRDL FKEGKKRAPC IIYIDEIDAI GRQRSGTESM GQGSSGESEQ TLNQLLVEMD
Consensus GLGAARVRdL FKEaraRAPC I!YIDEIDA! GrqRSgT..M gqgSngEeEQ TLNQLLVEMD
481 540
PGN_HUMAN GMGTTDHVIV LASTNRADIL DGALMRPGRL DRHVFIDLPT LQERREIFEQ HLKSLKLTQS
CG2658_DRO GMATKEGVLM LASTNRADIL DKALLRPGRF DRHILIDLPT LAERKEIFEK HLSSVKLESP
Consensus GMaTk#gVim LASTNRADIL DgAL$RPGRl DRH!lIDLPT LaERrEIFEq HLkSlKLeqp
541 600
PGN_HUMAN STFYSQRLAE LTPGFSGADI ANICNEAALH AAREGHTSVH TLNFEYAVER VLAGTAKKSK
CG2658_DRO PTTFSQRLAR LTPGFSGADI ANVCNEAALH AARNTQMEVS SKNLEYAVER LVGGTEKRSH
Consensus pTf%SQRLAr LTPGFSGADI AN!CNEAALH AAR#gqmeVh slNlEYAVER llaGTaKrSh
601 660
PGN_HUMAN ILSKEEQKVV AFHESGHALV GWMLEHTEAV MKVSITPRTN AALGFAQMLP RDQHLFTKEQ
CG2658_DRO ALSLAERKVI AYHESGHALV GWMLPNSDIL LKVTIVPRTS LALGFAQYTP SEQHLYSKEE
Consensus aLSlaErKV! A%HESGHALV GWMLens#al $KVsItPRTn aALGFAQmlP r#QHL%sKE#
661 720
PGN_HUMAN LFERMCMALG GRASEALSFN EVTSGAQDDL RKVTRIAYSM VKQFGMAPGI GPISFPEAQE
CG2658_DRO LFDKMCMALG GRAAENLVFN RITTGAQNDL EKVTKIAYSQ IKKFGMNDTL GPIYVRDADE
Consensus LF#rMCMALG GRAaEaLsFN r!TsGAQ#DL rKVTrIAYSq !KqFGMadgi GPIsfr#A#E
721 780
PGN_HUMAN ----GLMGIG -RRPFSQGLQ QMMDHEARLL VAKAYRHTEK VLQDNLDKLQ ALANALLEKE
CG2658_DRO TEGGGAMGSG GKKPFSRAME SMIDNEARHV VASAYQTTEG ILTTHRDKLE KLAEALLEKE
Consensus ....GaMGiG .rrPFSra$# qMiDnEARhl VAkAYrhTEg !LqdnrDKL# aLA#ALLEKE
781 839
PGN_HUMAN VINYEDIEAL IGPPPHGPKK MIAPQRWIDA QREKQDLGEE ETEETQQPPL GGEEPTWPK
CG2658_DRO TLDYDQVVQL IGPPPYDLGK RQVESVEFEQ SLKNLSTDTD ATKA
Consensus ti#Y##!eaL IGPPPhdlgK rqaeqrei#a qrenqdlde# aTea...... .........