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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 1182 Check: 0 ..
Name: PYC_HUMAN Len: 1182 Check: 6395 Weight: 0.75
Name: CG1516-1/4_DRO Len: 1182 Check: 1966 Weight: 0.75
Name: CG1516-5_DROME Len: 1182 Check: 4091 Weight: 1.49
Name: Consensus Len: 1182 Check: 6577 Weight: 0.00
//
1 60
PYC_HUMAN MLKFRTVH GGLRLLGIRR TSTAPAASPN VRRLEYKPIK KVMVANRGEI AIRVFRACTE
CG1516-1/4 MFIPAAQSAY RTLRKTQPRV RLNAIFKNGY SSKVEYKPIR SVLVANRGEI AIRVFRACTE
CG1516-5_D MFIPAAQSAY RTLRKTQPRV RLNAIFKNGY SSKVEYKPIR SVLVANRGEI AIRVFRACTE
Consensus mfipaaqsay rtLRktqpRv rlnAifkngy sskvEYKPIr sV$VANRGEI AIRVFRACTE
61 120
PYC_HUMAN LGIRTVAIYS EQDTGQMHRQ KADEAYLIGR GLAPVQAYLH IPDIIKVAKE NNVDAVHPGY
CG1516-1/4 LGIKSVAVYS EQDKMHMHRQ KADESYIVGK GLPPVEAYLN IPELIRVCKE NDVDAVHPGY
CG1516-5_D LGIKSVAVYS EQDKMHMHRQ KADESYIVGK GLPPVEAYLN IPELIRVCKE NDVDAVHPGY
Consensus LGIksVA!YS EQDkmhMHRQ KADEsYi!Gk GLpPV#AYLn IP#lIrVcKE N#VDAVHPGY
121 180
PYC_HUMAN GFLSERADFA QACQDAGVRF IGPSPEVVRK MGDKVEARAI AIAAGVPVVP GTDAPITSLH
CG1516-1/4 GFLSERSDFA QAVIDAGLRF IGPSPEVVQK MGDKVAARVA AIEAGVPIVP GTDGPVTTKE
CG1516-5_D GFLSERSDFA QAVIDAGLRF IGPSPEVVQK MGDKVAARVA AIEAGVPIVP GTDGPVTTKE
Consensus GFLSERsDFA QAviDAGlRF IGPSPEVVqK MGDKVaARva AIeAGVP!VP GTDgP!Ttke
181 240
PYC_HUMAN EAHEFSNTYG FPIIFKAAYG GGGRGMRVVH SYEELEENYT RAYSEALAAF GNGALFVEKF
CG1516-1/4 EALEFCKKHG LPVIFKAAYG GGGRGMRVVR KMEDVEESFQ RASSEAKAAF GNGAMFIEKF
CG1516-5_D EALEFCKKHG LPVIFKAAYG GGGRGMRVVR KMEDVEESFQ RASSEAKAAF GNGAMFIEKF
Consensus EAlEFckkhG lP!IFKAAYG GGGRGMRVVr kmE#vEEs%q RAsSEAkAAF GNGA$F!EKF
241 300
PYC_HUMAN IEKPRHIEVQ ILGDQYGNIL HLYERDCSIQ RRHQKVVEIA PAAHLDPQLR TRLTSDSVKL
CG1516-1/4 IERPRHIEVQ LLGDKAGNVV HLYERDCSVQ RRHQKVVEIA PAPRLPIEIR DKMTEAAVRL
CG1516-5_D IERPRHIEVQ LLGDKAGNVV HLYERDCSVQ RRHQKVVEIA PAPRLPIEIR DKMTEAAVRL
Consensus IErPRHIEVQ lLGDkaGN!v HLYERDCS!Q RRHQKVVEIA PAprLpi#iR dk$TeaaVrL
301 360
PYC_HUMAN AKQVGYENAG TVEFLVDRHG KHYFIEVNSR LQVEHTVTEE ITDVDLVHAQ IHVAEGRSLP
CG1516-1/4 ARHVGYENAG TVEFLCDESG NFYFIEVNAR LQVEHTVTEE ITGIDLVQSQ IRVAEGMTLP
CG1516-5_D ARHVGYENAG TVEFLCDESG NFYFIEVNAR LQVEHTVTEE ITGIDLVQSQ IRVAEGMTLP
Consensus ArhVGYENAG TVEFLcDesG nfYFIEVNaR LQVEHTVTEE ITg!DLVqsQ IrVAEGmtLP
361 420
PYC_HUMAN DLGLRQENIR INGCAIQCRV TTEDPARSFQ PDTGRIEVFR SGEGMGIRLD NASAFQGAVI
CG1516-1/4 ELGYTQDKIV PRGYAIQCRV TTEDPANDFQ PNTGRLEVFR SGEGMGIRLD SASAYAGAII
CG1516-5_D ELGYTQDKIV PRGYAIQCRV TTEDPANDFQ PNTGRLEVFR SGEGMGIRLD SASAYAGAII
Consensus #LGytQ#kIv prGyAIQCRV TTEDPAndFQ P#TGRlEVFR SGEGMGIRLD sASA%aGA!I
421 480
PYC_HUMAN SPHYDSLLVK VIAHGKDHPT AATKMSRALA EFRVRGVKTN IAFLQNVLNN QQFLAGTVDT
CG1516-1/4 SPYYDSLLVK VISHASDLQS SASKMNRALR EFRIRGVKTN IPFLLNVLEN QKFLHGVLDT
CG1516-5_D SPYYDSLLVK VISHASDLQS SASKMNRALR EFRIRGVKTN IPFLLNVLEN QKFLHGVLDT
Consensus SPyYDSLLVK VIsHasDlqs sAsKMnRALr EFR!RGVKTN IpFLlNVL#N QkFLhGvlDT
481 540
PYC_HUMAN QFIDENPELF QLRPAQNRAQ KLLHYLGHVM VNGPTTPIPV KASPSPTDPV VPAVP-IGPP
CG1516-1/4 YFIDEHPQLF KFKPSLNRAQ KLLNYMGEVL VNGPQTPLAT TLKPALVSPH VPEVPLVTEP
CG1516-5_D YFIDEHPQLF KFKPSLNRAQ KLLNYMGEVL VNGPQTPLAT TLKPALVSPH VPEVPLICPR
Consensus yFIDEhP#LF kfkPslNRAQ KLLnY$GeV$ VNGPqTPlat tlkPalvsPh VPeVPl!.pp
541 600
PYC_HUMAN PAGFRDILLR EGPEGFARAV RNHPGLLLMD TTFRDAHQSL LATRVRTHDL KKIAPYVAHN
CG1516-1/4 PKGLREVLVC EGPEAFAKEV RNRKELLLMD TTFRDAHQSL LATRVRSHDL LKISPYVTHK
CG1516-5_D KL
Consensus p.g.r..l.. egpe.fa..v rn...lllmd ttfrdahqsl latrvr.hdl .ki.pyv.h.
601 660
PYC_HUMAN FSKLFSMENW GGATFDVAMR FLYECPWRRL QELRELIPNI PFQMLLRGAN AVGYTNYPDN
CG1516-1/4 FNNLYSLENW GGATFDVALR FLHECPWERL EEMRKRIPNI PFQMLLRGAN AVGYTSYPDN
CG1516-5_D
Consensus f..l.s.enw ggatfdva.r fl.ecpw.rl .e.r..ipni pfqmllrgan avgyt.ypdn
661 720
PYC_HUMAN VVFKFCEVAK ENGMDVFRVF DSLNYLPNML LGMEAAGSAG GVVEAAISYT GDVADPSRTK
CG1516-1/4 VVYKFCELAV QTGMDIFRVF DSLNYLPNLI LGMEAAGKAG GVVEAAISYT GDVSDPKRTK
CG1516-5_D
Consensus vv.kfce.a. ..gmd.frvf dslnylpn.. lgmeaag.ag gvveaaisyt gdv.dp.rtk
721 780
PYC_HUMAN YSLQYYMGLA EELVRAGTHI LCIKDMAGLL KPTACTMLVS SLRDRFPDLP LHIHTHDTSG
CG1516-1/4 YDLKYYTNLA DELVKAGTHV LCIKDMAGLL KPESARLLIT AIRDKHPDIP IHIHTHDTSG
CG1516-5_D
Consensus y.l.yy..la .elv.agth. lcikdmagll kp.....l.. ..rd..pd.p .hihthdtsg
781 840
PYC_HUMAN AGVAAMLACA QAGADVVDVA ADSMSGMTSQ PSMGALVACT RGTPLDTEVP MERVFDYSEY
CG1516-1/4 AGVASMLACA NAGADVVDVA VDSMSGMTSQ PSMGAVVASL QGTPLDTNLD LRTVSEYSAY
CG1516-5_D
Consensus agva.mlaca .agadvvdva .dsmsgmtsq psmga.va.. .gtpldt... ...v..ys.y
841 900
PYC_HUMAN WEGARGLYAA FDCTATMKSG NSDVYENEIP GGQYTNLHFQ AHSMGLGSKF KEVKKAYVEA
CG1516-1/4 WEQTRTLYAP FECTTTMRSG NADVYLNEIP GGQYTNLQFQ AFSLGLGDFF EDVKKAYREA
CG1516-5_D
Consensus we..r.lya. f.ct.tm.sg n.dvy.neip ggqytnl.fq a.s.glg..f ..vkkay.ea
901 960
PYC_HUMAN NQMLGDLIKV TPSSKIVGDL AQFMVQNGLS RAEAEAQAEE LSFPRSVVEF LQGYIGVPHG
CG1516-1/4 NLLLGDIIKV TPSSKVVGDL AQFMVQNDLT ADQVLERAEE LSFPKSVVEY LQGSIGIPHG
CG1516-5_D
Consensus n..lgd.ikv tpssk.vgdl aqfmvqn.l. .......aee lsfp.svve. lqg.ig.phg
961 1020
PYC_HUMAN GFPEPFRSKV LKDLPRVEGR PGASLPPLDL QALEKELVDR HGEEVTPEDV LSAAMYPDVF
CG1516-1/4 GFPEPLRSRV LKDMPRIEGR PGAELKDLDF DKLKKELQES H-TCVTNRDV MSAALYPQVT
CG1516-5_D
Consensus gfpep.rs.v lkd.pr.egr pga.l..ld. ..l.kel... h...vt..dv .saa.yp.v.
1021 1080
PYC_HUMAN AHFKDFTATF GPLDSLNTRL FLQGPKIAEE FEVELERGKT LHIKALAVS- DLNRAGQRQV
CG1516-1/4 NDFLNFREKY GPVDKLDTRI FLTGPKVGEE FDVPLERGKT LSVKALAVSA DLKPNGIREV
CG1516-5_D
Consensus ..f..f.... gp.d.l.tr. fl.gpk..ee f.v.lergkt l..kalavs. dl...g.r.v
1081 1140
PYC_HUMAN FFELNGQLRS ILVKDTQAMK EMHFHPKALK DVKGQIGAPM PGKVIDIKVV AGAKVAKGQP
CG1516-1/4 FFELNGQLRA VHILDKEAVK EIHVHPKANK SNKSEVGAPM PGTVIDIRVK VGDKVEKGQP
CG1516-5_D
Consensus ffelngqlr. ....d..a.k e.h.hpka.k ..k...gapm pg.vidi.v. .g.kv.kgqp
1141 1182
PYC_HUMAN LCVLSAMKME TVVTSPMEGT VRKVHVTKDM TLEGDDLILE IE
CG1516-1/4 LVVLSAMKME MVVQSPLAGV VKKLEIANGT KLEGEDLIMI IE
CG1516-5_D
Consensus l.vlsamkme .vv.sp..g. v.k....... .leg.dli.. ie