Go directly to Alignment 
Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
 ! is anyone of IV
 $ is anyone of LM
 % is anyone of FY
 # is anyone of NDQEBZ

 MSF:    308    Check:   0         ..
 Name: SCO1           Len:   308  Check: 3118  Weight:  0.75
 Name: CG8885_DROME   Len:   308  Check: 3340  Weight:  0.75
 Name: SCO2           Len:   308  Check: 7019  Weight:  1.49
 Name: Consensus      Len:   308  Check: 5335  Weight:  0.00

//

            1                                                              60
      SCO1  MAMLVLVPGR VMRPLGGQLW RFLPRGLEFW GPAEGTARVL LRQFCARQAE AWRASGRPGY
CG8885_DRO                                                             MSRSLQ
      SCO2                                          MLL LTRSPTAWHR LSQLKPRVLP
 Consensus  .......... .......... .......... .........l l......... ......R.l.

            61                                                            120
      SCO1  CLGTRPLSTA RPPPPWSQKG PGDSTRPSKP GPVSWKSLAI TFAIGGALLA GMKHVKKEKA
CG8885_DRO  RLVGSCRRWA QQPAIRHYAA PADSTKGK-- GPISWRSLAV IGALGAGGVG FMLYVKSEKD
      SCO2  GTLGGQALHL RSWLLSRQGP AETGGQGQPQ GPGLRTRLLI TGLFGAGLGG AWLALRAEKE
 Consensus  .l.g.....a r.p....q.. p.dst.g... GP.sw.sLa! tga.Gagl.g .ml.vk.EK.

            121                                                           180
      SCO1  EKLEKERQRH IGKPLLG-GP FSLTTHTGER KTDKDYLGQW LLIYFGFTHC PDVCPEELEK
CG8885_DRO  EARMKERQRQ LGKAAIG-GS WELVDSQGAV RKSEDFLGKW LLIYFGFTHC PDICPDELEK
      SCO2  RLQQQKRTEA LRQAAVGQGD FHLLDHRGRA RCKADFRGQW VLMYFGFTHC PDICPDELEK
 Consensus  e...keRqr. lgkaa.G.G. f.L.dh.G.. r...D%lGqW lLiYFGFTHC PD!CP#ELEK

            181                                                           240
      SCO1  MIQVVDEIDS ITTLPDLTPL FISIDPERDT KEAIANYVKE FSPKLVGLTG TREEVDQVAR
CG8885_DRO  MAAVVDEVEK SPQTPAVQPI FITVDPERDS KEVVAKYVKE FSPKLLGLTG TVEQIRKVCK
      SCO2  LVQVVRQLEA EPGLPPVQPV FITVDPERDD VEAMARYVQD FHPRLLGLTG STKQVAQASH
 Consensus  $.qVVd#.#. .p.lP.vqP. FIt!DPERD. kEa.A.YVk# FsPkLlGLTG t.e#!.qv..

            241                                                           300
      SCO1  AYRVYYSPGP KDEDEDYIVD HTIIMYLIGP DGEFLDYFGQ NKRKGEIAAS IATHMRPYRK
CG8885_DRO  AFRVYFSAGP RDEDNDYIVD HTIIMYLVNP DGEFVDYYGQ NRDKDQCVAS ILVNIAKWNS
      SCO2  SYRVYYNAGP KDEDQDYIVD HSIAIYLLNP DGLFTDYYGR SRSAEQISDS VRRHMAAFRS
 Consensus  a%RVY%saGP kDED#DYIVD HtIimYL.nP DGeF.DY%Gq nr.k.#i.aS !..hma..rs

            301  
      SCO1  K       
CG8885_DRO  MNKKGWFS
      SCO2  VLS     
 Consensus  ........