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Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
! is anyone of IV
$ is anyone of LM
% is anyone of FY
# is anyone of NDQEBZ
MSF: 156 Check: 0 ..
Name: SSB_HUMAN Len: 156 Check: 4639 Weight: 1.00
Name: mtSSB_DROME Len: 156 Check: 7157 Weight: 1.00
Name: Consensus Len: 156 Check: 82 Weight: 0.00
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1 60
SSB_HUMAN MFRRP VLQVLRQFVR HESETTTSLV ---LERSLNR VHLLGRVGQD PVLRQVEGKN
mtSSB_DROM MQHTRRMLNP LLTGLRNLPA RGATTTTAAA PAKVEKTVNT VTILGRVGAD PQLRGSQ-EH
Consensus .....rmrrP lLqgLR#lpa reaeTTTaaa ...lErslNr VhiLGRVGaD PqLRqs#.en
61 120
SSB_HUMAN PVTIFSLATN EMWRSGDSEV YQLGDVSQKT TWHRISVFRP GLRDVAYQYV KKGSRIYLEG
mtSSB_DROM PVVTFSVATH TNYK------ YENGDWAQRT DWHRVVVFKP NLRDTVLEYL KKGQRTMVQG
Consensus PVtiFSlATn enwr...... Y#nGDwaQrT dWHR!sVFrP nLRDtal#Yl KKGqRiml#G
121 156
SSB_HUMAN KIDYGEYMDK NNVRRQATTI IADNIIFLSD QTKEKE
mtSSB_DROM KITYGEITDQ QGNQKTSTSI IADDVLFFRD ANN
Consensus KIdYGEimDq #nnrrqaTsI IAD#!iFlrD ann...