2008

Nils-Einar Eriksson, Domenica D’Elia, Erik Bongcam-Rudloff
EMBnet, a brief history and a current picture (2008)
EMBnet.news, 2008, 14 (3), 3-6

Antonacci1, R., Di Tommaso, S., Lanave, C., Cribiu, E. P., Ciccarese S. and S. Massari
Organization, structure and evolution of 41 Kb of genomic DNA spanning the D-J-C region of the sheep TRB locus. (2008)
Mol. Immunol. 45(2):493ñ509 †(IP06: 4.768)

G. Gadaleta, C.Saccone
Chapter Organization and Evolution of Metazoan Mitochondrial Genomes (2008)
in the book Dual Genome Coordination of Energy Biogenesis – edited by: Graziano Pesole, David Horner and Marco Sardiello.

Castrignanò T, D’Antonio M, Anselmo A, Carrabino D, D’Onorio DM, D’Erchia A, Licciulli F, Mangiulli M, Mignone F, Pavesi G, Picardi E, Riva A, Rizzi R, Bonizzoni P, Pesole G.
ASPicDB: A database resource for alternative splicing analysis (2008)
Bioinformatics. 2008 May 15;24(10):1300-4. Epub 2008 Apr 3.

Meo, P. D’Onorio De; Carrabino, D.; D’Antonio, M.; D’Addabbo, A.; Liuni, S.; Mignone, F.; Pesole, G.; Ancona, N.
HT-RLS: High-Throughput Web Tool for Analysis of DNA Microarray Data Using RLS classifiers (2008)
Cluster Computing and the Grid, 2008. CCGRID’08. 8th IEEE International Symposium on
Volume , Issue , 19-22 May 2008 Page(s):747 – 752.

De Grassi A., Lanave C., Saccone C.
Genome duplication and gene-family evolution: the case of three OXPHOS gene families. (2008)
Gene 2008 Jun 23

M. Santamaria, S.Vicario, G. Pappadà, G. Scioscia, C. Scazzocchio, C. Saccone
Towards barcode markers in fungi: an intron map of ascomycota mitochondria (2008)
Sottoposto a BMC

Mignone F, Anselmo A, Donvito G, Maggi GP, Grillo G, Pesole G.
Genome-wide assessment of coding and non-coding conserved sequence tags in human and mouse genomes. (2008)
BMC Genomics 2008, 9:277

Abad P, Gouzy J, Aury JM, Castagnone-Sereno P, Danchin EG, Deleury E, Perfus-Barbeoch L, Anthouard V, Artiguenave F, Blok VC, Caillaud MC, Coutinho PM, Dasilva C, De Luca F, Deau F, Esquibet M, Flutre T, Goldstone JV, Hamamouch N, Hewezi T, Jaillon O, Jubin C, Leonetti P, Magliano M, Maier TR, Markov GV, McVeigh P, Pesole G, Poulain J, Robinson-Rechavi M, Sallet E, SÈgurens B, Steinbach D, Tytgat T, Ugarte E, van Ghelder C, Veronico P, Baum TJ, Blaxter M, Bleve-Zacheo T, Davis EL, Ewbank JJ, Favery B, Grenier E, Henrissat B, Jones JT, Laudet V, Maule AG, Quesneville H, Rosso MN, Schiex T, Smant G, Weissenbach J, Wincker P.
Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita. (2008)
Nat Biotechnol. 2008 Aug;26(8):909-15. Epub 2008 Jul 27. PMID

Gissi C, Iannelli F, Pesole G.
Evolution of the mitochondrial genome of Metazoa as exemplified by comparison of congeneric species. (2008)
Heredity. 2008 Oct;101(4):301-20.

Pesole G.
What is a gene? An updated operational definition. (2008)
Gene. 2008 Jul 1;417(1-2):1-4. Epub 2008 Mar 26.

Pavesi G, Zambelli F, Caggese C, Pesole G.
Exalign: a new method for comparative analysis of exon-intron gene structures. (2008)
Nucleic Acids Res. 2008 Apr 8; May;36(8):e47

Horner DS, Pirovano W, Pesole G.
Correlated substitution analysis and the prediction of amino acid structural contacts. (2008)
Brief Bioinform. 2008 vol. 9(1) 46-56

G.P Maggi , D. D’Elia , A. Gisel, G. Donvito, G. Cuscela, G. La Rocca
Tutorial on Grid Computing. Satellite event of the EMBnet Conference 2008 (2008).
EMBnet.news 14(4): 15-16, ISSN: 1023-4144
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