anno 2009

Mangiulli M, Valletti A, Caratozzolo MF, Tullo A, Sbisà E, Pesole G, D’Erchia AM.
Identification and functional characterization of two new transcriptional variants of the human p63 gene.
Nucleic Acids Res. 2009 Oct;37(18):6092-104.
http://nar.oxfordjournals.org

Gerbino A, Ranieri M, Lupo S, Caroppo R, Debellis L, Maiellaro I, Caratozzolo MF, Lopez F, Colella M.
Ca2+-dependent K+ efflux regulates deoxycholate-induced apoptosis of BHK-21 and Caco-2 cells.
Gastroenterology. 2009 Sep;137(3):955-64, 964.e1-2.

Lefkimmiatis K*, Caratozzolo MF*, Merlo P, D’Erchia AM, Navarro B, Levrero M, Sbisà E, Tullo A.
p73 and p63 sustain cellular growth by transcriptional activation of cell cycle progression genes.
Cancer Res. 2009 Nov 15;69(22):8563-71.
{* co-autori}

P. Fuzio, G. Lucarelli, E. Perlino, M. Battaglia, C. Bettocchi, F.P. Selvaggi, P. Ditonno.
Androgen Deprivation Therapy Regulation of Beta1C Integrin Expression in Prostate Cancer” (2009)
Oncology Reports 22(2): 327-335
http://www.spandidos-publications.com/or/22/2/327

Navarro B, Pantaleo V, Gisel A, Moxon S, Dalmay T, Bisztray G, Di Serio F, Burgyán J.
Deep sequencing of viroid-derived small RNAs from grapevine provides new insights on the role of RNA silencing in plant-viroid interaction.
PLoS One. 2009 Nov 5;4(11):e7686.
PMID: 19890399

Deep sequencing of the small RNAs derived from two symptomatic variants of a chloroplastic viroid: implications for their genesis and for pathogenesis.
Di Serio F, Gisel A, Navarro B, Delgado S, Martínez de Alba AE, Donvito G, Flores R.
PLoS One. 2009 Oct 21;4(10):e7539.
PMID: 19847296

Turi A, Loglisci C, Salvemini E, Grillo G, Malerba D, D’Elia D.
Computational annotation of UTR cis-regulatory modules through Frequent Pattern Mining.
BMC Bioinformatics. 2009 Jun 16;10 Suppl 6:S25.
PMID: 19534751

D’Elia D, Gisel A, Eriksson NE, Kossida S, Mattila K, Klucar L, Bongcam-Rudloff E.
The 20th anniversary of EMBnet: 20 years of bioinformatics for the Life Sciences community.
BMC Bioinformatics. 2009 Jun 16;10 Suppl 6:S1.
PMID: 19534734

M. Mirto, I. Epicoco, S. Fiore, M. Cafaro, A. Negro, D. Tartarini, D. Lezzi, O. Marra, A. Turi, A. Ferramosca, V. Zara, G. Aloisio, G. Donvito, L. Carota, G. Cuscela, G. P. Maggi, G. La Rocca, M. Mazzucato, S. My, G. Selvaggi, G. Scioscia, P. Leo, L. Di Pace, G. Pappada‘, V. Quinto, M. Berardi, F. Falciano, A. Emerson, E. Rossi, G. Lavorgna, A. Vanni, Lisa Bartoli, P. Di Lena, P. Fariselli, R. Fronza, L. Margara, L. Montanucci, P. L. Martelli, I. Rossi, M. Vassura, R. Casadio, T. Castrignan√ö, D. D‘Elia, G. Grillo, F. Licciulli, S. Liuni, A. Gisel, M. Santamaria, S. Vicario, C. Saccone, A. Anselmo, D. Horner, F. Mignone, G. Pavesi, E. Picardi, V. Piccolo, M. Re, F. Zambelli, G. Pesole.
The LIBI Grid Platform for Bioinformatics (Handbook chapter) (2009)
Handbook of Research on Computational Grid Technologies for Life Sciences, Biomedicine and Healthcare, IGI Global.

E. Bongcam-Rudloff, D. D’Elia, A. Gisel, S. Kossida, K. Mattila, L. Klucar
Proceedings from European Molecular Biology Network (EMBnet) Conference 2008: 20th Anniversary Celebration. Leading applications and technologies in bioinformatics.
BMC Bioinformatics volume 10, Suppl 6 (2009) (LINK).

D. D’Elia, A. Gisel, N.E. Eriksson , S. Kossida , K. Mattila , L. Klucar, E. Bongcam-Rudloff
The 20th anniversary of EMBnet: 20 years of bioinformatics for the Life Sciences community (2009)
BMC Bioinformatics, 10(Suppl 6):S1, ISSN: 1471-21051. (LINK)

A. Turi , C. Loglisci , E. Salvemini , G. Grillo, D. Malerba, D. D’Elia
Computational annotation of UTR cis-regulatory modules through Frequent Pattern Mining (2009)
BMC Bioinformatics, 10(Suppl 6):S25, ISSN: 1471-2105 (LINK)